Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015813275.1_cds_XP_016497490.1_11612
CDS Infomation

[gene=LOC107816306] [db_xref=GeneID:107816306] [protein=probable inactive serine/threonine-protein kinase bub1] [protein_id=XP_016497490.1] [location=complement(join(63600..64739,64827..64911,65969..66126,66206..66350,66443..66543))] [gbkey=CDS]
Sequence

ATGTCAATTACTACTTCAATGCAGTACAATGACCTCTTCTCTTCTCTGGTCTCTGACATT
AAATCCTACAATGGCAAAGACCCTCTTTGCCCTTGGCTCCGAGGAATAAAGAAAATGAAA
GAGTCATTACCTCCGCAGCTGCTTAAGGAGAAACTGCCACGTTTTCTTCAGAAATGTGCA
CAGACTTTTGAGACCGATCGCCGTTATGCTAATGATATGCGTTATCTTCGTGTCTGGTTA
CGACTGATGGAATATGTGGATGAGCCAAAAACGGTACTAAAAACCATGGAGTTGAATCGT
ATCGGGATGAAAAAATCTGCGTTTTACATAGCATATGCTCTTTATTATGAAAAGGTTAAA
AAGTTTGAGGCGGCGGAGAAGATGTACCGTTTGGGCGTGCAGAACCTTGCAGAGCCACTT
GATGAGTTACATAAATCATATGAGGAGTTTCTTCATCGCATGGAACATCGTAAGAATAAG
AGGATACAGCGCCAAGAAGGAAAAAATAAAATATGTCCTCTTGGTGCTAAAAACATCACT
TCGAAGAACAATGAGATTGAGGAAAATGATGAGAATTTAAGTGGAACAGAAAACAATCCT
ATCAGCATCAGGGATCAGTTACCCACCACACGATCCAAGCATTTAAATATGAAAAACAAG
GTTGCCATTTCACAGGGCTCCAGGAGAGAGTTTACCAGTGAAGATACAGTAGTTGTTAAA
TTTGTTGGTAATGCCATTGTTGGGAAGTCTGCTGTGGAAGATGCACGACATCATGGTCTG
GTGGAACCTACCATTAATACGAAGGAGGCCATATATGCAATTAATAACATGTTTCGAGGG
CCATTAGAGCCTTCTCTGGCTGGCAAACATTCACGTCGAAACCAGCCAAAAGTTGATCAG
AGATTAAACAATGGTTTTGAAGTATTTATTGATGAAAACACAGATGGTGTTGTTGGATCA
TCTCACCAAACCTTGGCAAATGGTTCATCGGTGCCACAAGCCACTACAGTTAAAAATCAA
AAGCCCATGCAGGAGCCATTTCAGATATTCATTGATGATGACAACACCGTTGATGTGATT
GAGGGAATTCATGAGAAGGATAAGTCAGATATGGATAACTCTGACAATTTGACTGGATGT
ACTATTGAAGAGAGGATTGAGAACGGTTTTGTGTTTCCGCGTCCTTCTGATGTTACTTCA
GAATGTTCTGGAGATCCAAATTTTGAAAGGCCACCTCAAACAAGACTCCGTAGGGAGGAC
ACAGTTGTATACAAATTTGTAGGTTCCACCATTTCAGAAGAATCACAGGTCGAAAATGTT
TGCCATCATGGCCTCGTAGAACCAACAATTAACTTGAAGGAGGCTATGGATGATATTAAT
AGCATGTTCGGAAAGCCAATCGAGTTTACAAGGAAAAGCAGGCCAAAGAAACGGGAACAA
GCACCTAAGATGGAGAGAGATGACAGTGGGTTCATGATACTTCCAGATGATGAGATACAC
CATCAACCAAAGAGTTCCCTGCCAACTTCCACGGCAGAAAGGGGAAGTGACTTGTTCGAG
CAAACTGTGTGCACAAAGGAGGCAATGGATGACATAAATAAAATGTTTGCAATGCCATTG
GATTTCTAA

Peptide Sequence

PEP ID

XP_016497490.1
PEP Infomation

PREDICTED: probable inactive serine/threonine-protein kinase bub1 [Nicotiana tabacum]
Sequence

MSITTSMQYNDLFSSLVSDIKSYNGKDPLCPWLRGIKKMKESLPPQLLKEKLPRFLQKCA
QTFETDRRYANDMRYLRVWLRLMEYVDEPKTVLKTMELNRIGMKKSAFYIAYALYYEKVK
KFEAAEKMYRLGVQNLAEPLDELHKSYEEFLHRMEHRKNKRIQRQEGKNKICPLGAKNIT
SKNNEIEENDENLSGTENNPISIRDQLPTTRSKHLNMKNKVAISQGSRREFTSEDTVVVK
FVGNAIVGKSAVEDARHHGLVEPTINTKEAIYAINNMFRGPLEPSLAGKHSRRNQPKVDQ
RLNNGFEVFIDENTDGVVGSSHQTLANGSSVPQATTVKNQKPMQEPFQIFIDDDNTVDVI
EGIHEKDKSDMDNSDNLTGCTIEERIENGFVFPRPSDVTSECSGDPNFERPPQTRLRRED
TVVYKFVGSTISEESQVENVCHHGLVEPTINLKEAMDDINSMFGKPIEFTRKSRPKKREQ
APKMERDDSGFMILPDDEIHHQPKSSLPTSTAERGSDLFEQTVCTKEAMDDINKMFAMPL
DF

Transcript Sequence

Gene sequence data has not been registered.